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Re: [Seqan-dev] Is it thread safe to use Seqan for sequence alignment?

<-- thread -->
<-- date -->
  • From: Tianyang Li 李天阳 Tommy Li <tmy1018@gmail.com>
  • To: seqan-dev@lists.fu-berlin.de
  • Date: Mon, 30 Jul 2012 11:09:28 +0800
  • Cc: anne-katrin.emde@fu-berlin.de, david.weese@fu-berlin.de
  • Reply-to: SeqAn Development <seqan-dev@lists.fu-berlin.de>
  • Subject: Re: [Seqan-dev] Is it thread safe to use Seqan for sequence alignment?

Hi,

Sorry for sending this email directly to all of you, but I was
wondering if I can use Seqan's alignment functions in a multithreading
setting?

If not, are there other C/C++ libraries that you would recommend?

Thanks!

Best,
Tianyang

On Sun, Jul 29, 2012 at 10:21 PM, Tianyang Li 李天阳 Tommy Li
<tmy1018@gmail.com> wrote:
> Hi,
>
> I have a question about Seqan's thread safety.
>
> Currently I'd like to use Seqan to do Smith-Waterman alignment of
> nucleotide  sequences, and I'd like to speed it up by multi-threading.
>
> But I'm not sure about whether it'll be thread safe to do so.
>
> Thanks!
>
> Best,
> Tianyang



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    • [Seqan-dev] Is it thread safe to use Seqan for sequence alignment?
      • From: Tianyang Li 李天阳 Tommy Li <tmy1018@gmail.com>
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