Re: [Seqan-dev] Top down iteration bug


Hi John,

sorry, I simply was snowed under with work. I could narrow down the bug to a fasta file of sequence 12 and 58 (counting starts at 0). Something is wrong with the lcp-Value of suffix 852 of seq12 ("AAA") and 771 of seq58 ("A"). The lcp-Value is 3 instead of 1, therefore the suffix tree is also wrong. I think problem is either the suffix array or the lcp table construction. I'm investigating.

Cheers,
David

John Reid schrieb:
Could someone check if ticket 93 is as serious a bug as I think it is?

http://trac.mi.fu-berlin.de/seqan/ticket/93

It has been open for 3 months now

Thanks,
John.

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