Re: [Seqan-dev] SwiftLocal specialization with Hamming distance - problems with WatermanEggert

From: &quot;Kehr, Birte&quot; &lt; Birte.Kehr@fu-berlin.de &gt;
To: 'SeqAn Development' &lt; seqan-dev@lists.fu-berlin.de &gt;
Date: Tue, 25 May 2010 10:36:35 +0200
Acceptlanguage: en-US, de-DE
Reply-to: SeqAn Development &lt; seqan-dev@lists.fu-berlin.de &gt;
Subject: Re: [Seqan-dev] SwiftLocal specialization with Hamming distance - problems with WatermanEggert

"Kehr, Birte" <Birte.Kehr@fu-berlin.de> · Tue, 25 May 2010 10:36:35 +0200

Hi Fabian,

> I've updated my local version to the current trunk but I still get a 
"Bus error" when running the Waterman Eggert algorithm. In fact the very 
first of the examples of alignment_local demo causes the problem. I'm 
working on i686-apple-darwin9-gcc-4.0.1 on a Mac osx.
> [...]
> So I take it that it has not been initialized properly.

Thanks, there was an initialization problem that did not appear under Linux and Windows. It is fixed now.

Cheers, Birte