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[Seqan-dev] global position range

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<-- date -->
  • From: John Reid <j.reid@mail.cryst.bbk.ac.uk>
  • To: SeqAn Development <seqan-dev@lists.fu-berlin.de>
  • Date: Fri, 15 Jul 2011 16:58:25 +0100
  • Reply-to: SeqAn Development <seqan-dev@lists.fu-berlin.de>
  • Subject: [Seqan-dev] global position range

Suppose I am at a vertex of a suffix array created from a set of strings. If I take one occurrence of the vertex I can access the local and global positions via the posGlobalize() and posLocalize() functions. The local position is the id of the suffix's sequence in the string set and the position of the suffix in the string. The global position is an int. What is the range of the global position? Does it range between 0 and N where N is the number of characters in the string set?

Thanks,
John.



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