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[Seqan-dev] CharString question

<-- thread -->
<-- date -->
  • From: Raymond Wan <rwan@cuhk.edu.hk>
  • To: seqan-dev@lists.fu-berlin.de
  • Date: Thu, 09 Feb 2012 13:26:46 +0800
  • Reply-to: SeqAn Development <seqan-dev@lists.fu-berlin.de>
  • Subject: [Seqan-dev] CharString question

Hi all,

Somewhat of a basic question, but I haven't been able to figure it out.

How does one take a substring (and if possible, prefix or suffix) of a
CharString?

And how does one find out the length of a CharString?

And can someone tell me the reasoning for creating CharString type in SeqAn and
not just using (or extending) C++'s <string>?  Likewise, I've noticed
functions, etc. that is also done by other libraries -- Boost is the one that
comes to mind.  I can't think of examples at the moment, but was there any
reason for duplicating such effort?  Was it to not rely on other non-standard
libraries?

Thank you!

Ray






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    • Re: [Seqan-dev] CharString question
      • From: Manuel Holtgrewe <manuel.holtgrewe@fu-berlin.de>
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