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[Seqan-dev] ESA on GPU

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  • From: John Reid <j.reid@mail.cryst.bbk.ac.uk>
  • To: SeqAn Development <seqan-dev@lists.fu-berlin.de>
  • Date: Tue, 26 Jun 2012 15:25:42 +0100
  • Reply-to: SeqAn Development <seqan-dev@lists.fu-berlin.de>
  • Subject: [Seqan-dev] ESA on GPU

Hi,

The algorithm I'm working on is embarrassingly parallelisable. I wonder if anyone has any experience using Seqan on GPUs?

I did find this page:
http://www.mi.fu-berlin.de/w/ABI/ThesisGPGPUSeqan
but it is more a plan of work to do than practical advice.

Thanks,
John.
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