[Seqan-dev] FragStore question

[Val Antonescu <val.antonescu@gmail.com>]

Hi all,

I am a newbie in SeqAn. I want to start by thanking all for this awesome library, the developers for their great work and the users for their valuable feedback.

I am trying to load some bam file records into a FragStore and although SeqAn has some excellent tutorials I failed to achieve this. Since I am sure this problem have been solved a while ago I decided to ask here. So my problem can be formulated in 3 simple steps:

1) open a bam file

2) read a bam file record

3) IF bam file record passes my filter THEN load it into FragStore

Any hints, tips or documentation I should read that can help me achieve this?

thanks,

val