[Seqan-dev] countKmers

["Henderson, Stephen" <s.henderson@ucl.ac.uk>]

Hello

I think I'm confused by what is the current/trunk/development versions? I have downloaded 1.4 which I think is the trunk? I had to change a few keywords (Mapped -> StringReader) to make my old code work. But I do not see the useful countKmers function that I downloaded the latest version for:

countKmers(kmerCounts, sequence, k)
countKmers(kmerCounts, backgroundFrequencies, sequence, k)
countKmers(kmerCounts, bgModel, sequence, k)

This should be in align_free and align_free.h ?

Is this in a dev version somewhere?

Thanks
Stephen Henderson
UCL Cancer Institute