[Seqan-dev] Hello from the khmer project!
- From: "C. Titus Brown" <ctb@msu.edu>
- To: seqan-dev@lists.fu-berlin.de
- Date: Fri, 21 Nov 2014 09:38:57 -0500
- Cc: "Michael R. Crusoe" <mcrusoe@msu.edu>
- Reply-to: SeqAn Development <seqan-dev@lists.fu-berlin.de>
- Resent-cc: "Michael R. Crusoe" <mcrusoe@msu.edu>
- Resent-date: Fri, 21 Nov 2014 09:44:45 -0500
- Resent-from: "C. Titus Brown" <ctb@msu.edu>
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- Subject: [Seqan-dev] Hello from the khmer project!
Dear SeqAn, just a brief intro and heads up — we have a PR for the khmer project, https://github.com/ged-lab/khmer/pull/642 that switches over to using SeqAn for our sequencing parsing. It will most likely be merged for the next major release, v1.2 If you’re unfamiliar with khmer, here’s an intro paper: http://files.figshare.com/1194736/wssspe13_ged.pdf At some point we hope to be chatting with you more closely about issues that include streaming support and threading. In the meantime please rely on us for any letters of support or collaboration that you can use! I’m the PI on the main khmer grant, and Michael Crusoe, CCed, is the lead khmer developer and community liaison. best, —titus ----------------------------- Dr. C. Titus Brown, ctbrown@ucdavis.edu Visiting Associate Prof., UC Davis http://ged.msu.edu/
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