hello, i'm fadhlan.=C2= =A0

i need help about using ConcurrentQueue for return function. because u= sing appendValue(target, value) is not thread safe in seqan 1.4.2 and 2.0.0= , i'm using appendValue(queue, value) for parallel.

the problem is

1. i cant send the value ex:"ACGT"= , instead i just can send ex:1, 1 in here is like a position ACGT is.=C2=A0=

2. i creating a function about it, so t= he return is a list of sequence, but using queue i just return the position= of the sequence, but i cant return it.

the question is

1. can i send value ex:"ACGT" to queue?

2. can i return it if i using a function (ex: Con= currentQueue<unsigned> spectrum()) ?

thanks.=C2=A0

best regards.

--001a1133e2c2378f340512186b5d-- From fadhlan.fari@gmail.com Wed Mar 25 13:46:05 2015 Received: from relay1.zedat.fu-berlin.de ([130.133.4.67]) by list1.zedat.fu-berlin.de (Exim 4.85) for seqan-dev@lists.fu-berlin.de with esmtp (envelope-from ) id <1YakhA-000JxC-Au>; Wed, 25 Mar 2015 13:46:04 +0100 Received: from mail-yk0-f175.google.com ([209.85.160.175]) by relay1.zedat.fu-berlin.de (Exim 4.85) for seqan-dev@lists.fu-berlin.de with esmtps (envelope-from ) id <1YakhA-003Ta1-6F>; Wed, 25 Mar 2015 13:46:04 +0100 Received: by ykek76 with SMTP id k76so11695877yke.0 for ; Wed, 25 Mar 2015 05:46:02 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20120113; h=mime-version:date:message-id:subject:from:to:content-type; bh=YAiqaRItEqzHGKjs9OHBRozIFMGbdBPAQYI3wrE01T4=; b=xipJhG2scMVAsMLUfuBWul3tWfvYcsh70IEwIHRURJXjrAvQQ3Jv6VZ2XSlANlnf// p5x20O9CPAJrZHRaMcCBgfkHQ7UOgtM6AcPrFmgNMeeRclEflvaC2PH+cPDHZpu6FUrk Us38G/V9y3KY4b5BasfHMeRw89+3/kVq8g0lPhdzLoB2ng60Lm4b2XS3+qkOrjA4MNS3 43cYrcOJoc3dgSd4AMdoTokYejZ/LCsSLyR+hkYN4CLynxEmgp80eqN724Q8f16CrUm1 z/+rxUIQijXNiEB2OISvv9adD9iUJm6X5rMFJPJDinyz9u73KeETIM/v57qrL6l9CiDK H6UA== MIME-Version: 1.0 X-Received: by 10.52.7.106 with SMTP id i10mr8922168vda.11.1427287561920; Wed, 25 Mar 2015 05:46:01 -0700 (PDT) Received: by 10.52.65.137 with HTTP; Wed, 25 Mar 2015 05:46:01 -0700 (PDT) Date: Wed, 25 Mar 2015 19:46:01 +0700 Message-ID: From: Fadhlan Rizal To: seqan-dev@lists.fu-berlin.de Content-Type: multipart/alternative; boundary=20cf303344e11ee80305121c48c5 X-Originating-IP: 209.85.160.175 X-ZEDAT-Hint: A X-purgate: clean X-purgate-type: clean X-purgate-ID: 151147::1427287564-00000DE8-EF6B5BD3/0/0 X-Bogosity: Ham, tests=bogofilter, spamicity=0.285319, version=1.2.4 X-Spam-Flag: NO X-Spam-Status: No, score=-0.7 required=5.0 tests=FREEMAIL_FROM,HTML_MESSAGE, RCVD_IN_DNSWL_LOW,RCVD_IN_MSPIKE_H2,T_DKIM_INVALID X-Spam-Checker-Version: SpamAssassin 3.4.0 on Palau.ZEDAT.FU-Berlin.DE X-Spam-Level: Subject: [Seqan-dev] using appendValue for local parallel and join it X-BeenThere: seqan-dev@lists.fu-berlin.de X-Mailman-Version: 2.1.16 Precedence: list Reply-To: SeqAn Development List-Id: SeqAn Development List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Wed, 25 Mar 2015 12:46:05 -0000 --20cf303344e11ee80305121c48c5 Content-Type: text/plain; charset=UTF-8 Hello again, it's me fadhlan. i have another idea for using appendValue for local in parallel, and after parallel done i join them using appendValue, but i got error. so the program is like this StringSet SpectrumLocal[thread] StringSet Spectrum // example parallel for start to finish, the value ex:"ACGT" for start to finish appendValue(SpectrumLocal[id], value) //join them for i to thread appendValue(Spectrum, SpectrumLocal[i]) well, i get error about it. can i get another way to join all SpectrumLocal to Spectrum? thanks, best regard. --20cf303344e11ee80305121c48c5 Content-Type: text/html; charset=UTF-8 Content-Transfer-Encoding: quoted-printable

Hello again, it's me fadhlan.

i hav= e another idea for using appendValue for local in parallel, and after paral= lel done i join them using appendValue, but i got error.

so the program is like this

StringSet<Dn= aString> SpectrumLocal[thread]

StringSet<DnaString> Spec= trum

// example parallel for start to finish, = the value ex:"ACGT"

for start to finish

=C2= =A0 =C2=A0 =C2=A0appendValue(SpectrumLocal[id], value)

//join them

for i to thread

=C2=A0 =C2=A0 =C2=A0ap= pendValue(Spectrum, SpectrumLocal[i])

well, i get = error about it.

can i get another way to join all SpectrumLocal t= o Spectrum?=C2=A0

thanks,

best regard.

--20cf303344e11ee80305121c48c5--