[Seqan-dev] Seed end offset

[Saliya Ekanayake <esaliya@gmail.com>]

Hi Devs,

Looking at the example on seeds at (https://seqan.readthedocs.io/en/seqan-v1.4.2/Tutorial/SeedAndExtend.html), I want to check if the seed end offset is exclusive or inclusive.

For example, in the string, 

"The quick BROWN fox jumped again!"

the seed ROW starts at 11 and ends at 13 (zero-based) indices. The example lists 14 as the end offset, so does that mean the last index should be exclusive?

Thank you,
Saliya

--

Saliya Ekanayake, Ph.D

Postdoctoral Scholar

Performance and Algorithms Research (PAR) Group

Lawrence Berkeley National Laboratory

Phone: 510-486-5772