Re: [Seqan-dev] CMake and ZLIB

[Leon Kuchenbecker <lkuchenb@inf.fu-berlin.de>]

Hi Nick,

do you have a 'target_link_libraries' statement anywhere which adds the 
required libraries to the linker step?

Something like

> target_link_libraries (my_project ${SEQAN_LIBRARIES})

IIRC this also contains linking zlib.

When you're debugging this, try using "make VERBOSE=1" to see if the 
linker flag is included or not.

You seem to be building a cmake file that automatically obtains SeqAn. 
I've done something similar on other projects, maybe check out

https://github.com/lkuchenb/imseq/blob/master/cmake/SeqAn.cmake

it worked pretty well for me. If the include syntax hasn't changed from 
2.3.2 to 2.4.0, it should work for the latest release as well. This 
won't work if you need the current development version from the git repo 
though.

Cheers
Leon