[Seqan-dev] Unusual behaviors of the bs_tools/bisar

["Seqan Fan" <seqan_fan@mail.com>]

Anybody is using the bs_tools/bisar? I observe some weird behaviors. I make a small change in order to run bisar multiple times.

 

The change (in the bisar.cpp) is from

 

    int main(int argc, char const ** argv)

 

to

 

    int bisar_main(int argc, char const ** argv)

 

 

Then, I use my own int main(int argc, char const ** argv) in another file to call bisar_main() in a loop with multiple sets of arguments only with different gmr values.

 

The results are identical - gmr having no impact on the results!!

 

Why? Can you advise me of how to fix the problem?

 

Thanks.