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[Seqan-dev] file handling+fastq

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  • From: Matthias Dodt <matthias.dodt@mdc-berlin.de>
  • To: seqan-dev@lists.fu-berlin.de
  • Date: Thu, 01 Oct 2009 10:36:28 +0200
  • Reply-to: SeqAn Development <seqan-dev@lists.fu-berlin.de>
  • Subject: [Seqan-dev] file handling+fastq

Hi seqan users!

I am having some problems using the readMeta and read commands. I think the documentation might be outdated...

- the read(...) command hasnt a signature: read(file,data,meta,format) like indicated in the docs (it doesnt support meta)
- the readMeta function doesnt support fastq
- the guessFileformat() doesnt seem to work...

Is it possible to read fastq metainformation with build-in functions?

Thanks!

Greetings

mat



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