Re: [Seqan-dev] mason problem
- From: Mat <matthias.dodt@mdc-berlin.de>
- To: seqan-dev@lists.fu-berlin.de
- Date: Tue, 07 Dec 2010 11:24:33 +0100
- Reply-to: SeqAn Development <seqan-dev@lists.fu-berlin.de>
- Subject: Re: [Seqan-dev] mason problem
Excellent! Now it
works- Thanks! Best, mat Am 12/6/10 5:34 PM, schrieb Holtgrewe, Manuel: r8279 should fix this problem. The issue was deletion of characters in the haplotype behind the actual end. HTH *m Am 02.12.2010 um 15:58 schrieb Mat:Hi there! I got a problem with mason for 454 read simulation. The command was: mason 454 -sq -mp E_tenella.fasta (Eimeria tenella genome) The error message: .... contig # 2148/4707 contig # 2149/4707 contig # 2150/4707 contig # 2151/4707 contig # 2152/4707 contig # 2153/4707 /home/mat/seqan/seqan-trunk/projects/library/seqan/sequence_journaled/journal_entries_sorted_array.h:394 Assertion failed : it->virtualPosition >= delta was: 216739043537519363 < 18230286505148746552 Aborted Any suggestions? Thanks! best, mat <ATT00001..txt>_______________________________________________ seqan-dev mailing list seqan-dev@lists.fu-berlin.de https://lists.fu-berlin.de/listinfo/seqan-dev |
- References:
- [Seqan-dev] mason problem
- From: Mat <matthias.dodt@mdc-berlin.de>
- Re: [Seqan-dev] mason problem
- From: "Holtgrewe, Manuel" <manuel.holtgrewe@fu-berlin.de>
- [Seqan-dev] mason problem
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