Re: [Seqan-dev] SeqAn Restructuring Done

[Manuel Holtgrewe <manuel.holtgrewe@fu-berlin.de>]

Am 09.05.2011 um 06:35 schrieb Fabian Buske:

> Hi,
>
> I like the new structure of seqan.
> Below are, however, a couple of things I notices on Macs (with Xcode).
>
> 1.) When following the tutorial for "getting started" and jumping  
> right
> to the Mac section and following from there I noticed that the
> "forwards" are not generated when opening the sandbox and trying to
> compile the example resulting in plenty of compiler errors.
>
> # mkdir Debug
> # cd Debug
> # cmake ../.. -DCMAKE_BUILD_TYPE=Debug -G "Xcode"
> # open sandbox/my_sandbox/seqan_sandbox_my_sandbox.xcodeproj
> or
> # open core/demos/seqan_core_demos.xcodeproj
>
> Opening the overall project build/Debug/seqan.xcodeproj and compiling
> anything at all first seems to be a workaround to get the "forwards"
> generated.

Did you use the skel generator script or the zip file with the example  
sandbox? I remember that there were some issues with the generator  
that I fixed in [9570]. I forgot to update the ZIP file in the  
tutorial and just did this.

> 2.) Running the cmake command after populating the app folder does not
> seem to pick up additional header files in an app.
> cmake ../.. -DCMAKE_BUILD_TYPE=Debug -G "Xcode"
>
> 3.) The same seems to be true for the sandbox tests. Here neither  
> header
> nor cpp files dropped into the sandbox/test/testapp-folder are  
> picked up
> by cmake.

Did you look into the existing apps and tests? Headers have to be  
added manually to the seqan command adding a new test/app executable.

Bests,
Manuel