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Re: [Seqan-dev] match number of globalalignment

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<-- date -->
  • From: "Weese, David" <weese@campus.fu-berlin.de>
  • To: SeqAn Development <seqan-dev@lists.fu-berlin.de>
  • Date: Fri, 13 Jan 2012 07:59:46 +0100
  • Acceptlanguage: de-DE
  • Reply-to: SeqAn Development <seqan-dev@lists.fu-berlin.de>
  • Subject: Re: [Seqan-dev] match number of globalalignment

Hi,

I don't know what you mean with match number. Is this the alignment score which is returned by globalAlign?

Cheers
David

Von meinem iPhone gesendet

Am 13.01.2012 um 01:10 schrieb "Beifang Niu" <neilniu.cn@gmail.com>:

Hi all,

There is one example for pairwise global alignment http://trac.seqan.de/wiki/Tutorial/Alignments in the seqan tutorial. 
I can get the alignment output using the example code. I am wondering if there is any metafunction which can be used to get the match number of alignment. 
If not, how can i get the match number from an alignment result ?

thank you,
Beifang.
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      • From: Beifang Niu <neilniu.cn@gmail.com>
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