Re: [Seqan-dev] Trouble Using Custom SeedSpec
- From: Rahn, René <rene.maerker@fu-berlin.de>
- To: SeqAn Development <seqan-dev@lists.fu-berlin.de>
- Date: Fri, 05 Dec 2014 17:39:02 +0100
- Reply-to: SeqAn Development <seqan-dev@lists.fu-berlin.de>
- Subject: Re: [Seqan-dev] Trouble Using Custom SeedSpec
Hey Brett,
first you have to specify seed sets as SeedSet<Simple>, that’s why your code is not compiling.
Unfortunately this is also a bug (see:
https://github.com/seqan/seqan/issues/731), as the seed set can not be specialised with the customisations made to the seeds.
Currently the seed set always takes the default seed configuration disregarding the custom one.
We will fix this for the new release 2.0.0.
Thanks for detecting this.
cheers,
René
---
René Rahn
Ph.D. Student
--------------------------------
Institute of Computer Science
Algorithmic Bioinformatics (ABI)
--------------------------------
Freie Universität Berlin
Takustraße 9
14195 Berlin
--------------------------------
|
-
seqan-dev - December 2014 - Archives indexes sorted by:
[ thread ] [ subject ] [ author ] [ date ] - Complete archive of the seqan-dev mailing list
- More info on this list...