Hi,I was wondering if you have combined Ukkonen algorithm into the align_myers algorithm in Seqan_Release_1.3/seqan/align/align_myers.h. If yes, can you explain how you update the "last active cell"?
In addition, do you have a banded MyersUkkneon algorithm for global alignment. The one I found under Seqan_Release_1.3/seqan/find/find_myers_ukkonen is not applicable to global alignment.
Thanks, Lingjie Weng PhD student University of California, Irvine