Ahh yes ... now i found it. Couldn't find it by clicking on the TAlignedReadStore type (No direct link to alignedReadStore,Actually, this is documented as such for AlignedReadStoreElement.
That's good! Nice example for positionsGapToSeq(). The function doesn't pop up if i enter it in the search field but i guess that will be fixed with the next nightly build- and yes of course - contigGaps is a variable...- document the undocumented functions contigGaps() and positionGapToSeq() contigGaps is a variable. I fixed a documentation bug with the Gaps constructor, though.
Thank's a lot!- point out the differences if contig sequences are not available...Did in the documentation.
Nothing more to complain about;-)!
Have a nice day!