Re: [Seqan-dev] reading in fastq file with read not read2

[Bernd Jagla <bernd.jagla@pasteur.fr>]

thanks,
it seems that the corresponding file is also not there:
http://trac.mi.fu-berlin.de/seqan/browser/trunk/seqan/extras/demos/tutorial/stream/stream_read_fasta.cpp

Thanks,

Bernd

On 9/26/2011 3:32 PM, Holtgrewe, Manuel wrote:
> Bernd,
>
> good catch! For some reason, the Record Reading API demo from the tutorial was overwritten with opening compressed files. I just fixed this and you can now find the example here:
>
> http://trac.mi.fu-berlin.de/seqan/wiki/Tutorial/ReadingSequenceFiles#RecordReadingAPI
>
> Thanks,
> Manuel
>
> Am 26.09.2011 um 15:19 schrieb Bernd Jagla:
>
> > Hi,
> >
> > I would like to read a fastQ file with a single pass record by record
> > and not store the sequences in memory.
> > I only found read2 sample, which reads everything into memory (I
> > believe)....
> >
> > Could you please enlighten me on how to do that or where to find more
> > information about that?
> >
> > Thanks,
> >
> > Bernd
> >
> >
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